Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015819643.1_cds_XP_016500126.1_13984
CDS Infomation

[gene=LOC107818601] [db_xref=GeneID:107818601] [protein=NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial-like] [protein_id=XP_016500126.1] [location=complement(join(19519..20428,21708..22097,23128..23374,24840..25245))] [gbkey=CDS]
Sequence

ATGGGATTAGGGTTACTCGCTTCTCGAGCCCTACGATCTTCTAGAATCTTCCGTAACCCG
ACCAATTCCGTACTCCGCACCATCGTCTCCACACCGGAACTAAACAACGCCGATGCCGCC
GCAGCAACGGCACCAGCACCCGTACCGTCAGATCGAAGCCCGGTTGGTGGGGCACGAGTT
CATTTCCCTAACCCGGATGACGTCATCGAGGTCTTTGTGGATGGGTACCCGGTCAAAATC
CCTAAGGGCATGACTGTACTTCAAGCTTGTGAAATTGCTGGAGTTGATATCCCTAGGTTT
TGTTACCATAGCAGGCTAAGTATTGCTGGAAATTGCCGGATGTGTCTTGTTGAGGTTGAG
AAATCTCCTAAGCCTGTTGCTTCTTGTGCCATGCCTGCACTTCCAGGAATGAAGATCAAG
ACAGATACACCTATTGCCAAAAAGGCTCGTGAAGGAGTCATGGAGTTTTTGCTTATGAAT
CATCCGCTGGATTGTCCAATTTGTGATCAGGGAGGAGAATGTGATCTCCAAGATCAGTCT
ATGGCCTTTGGCTCAGACCGCGGGCGTTTCACTGAAATGAAGAGGTCTGTGGTTGACAAG
AATTTGGGCCCATTGGTGAAGACTGTGATGACCCGGTGCATCCAGTGTACAAGGTGCGTC
AGGTTTGCTACAGAAGTAGCTGGAACGGAGGACCTTGGAATGTTGGGTCGTGGTAGTGGA
GAAGAAATTGGAACTTATGTTGAAAAACTTATGACAAGTGAACTTTCAGGGAATGTGATT
GATATTTGTCCAGTTGGAGCCCTTACCTCAAAACCTTTTGCCTTTAAAGCCAGAAATTGG
GAGCTAAAGGGCACAGAAAGCATTGATGTGACTGATGCCGTTGGTTCTAACATTCGAATT
GATAGTAGAGGTCCGGAGGTCATGCGTGTTGTACCGCGATTAAACGAGGTACTGCACTTT
ATTATTGCTCTTATGTCTTTCCTCTCTGAAATGTTTAGTGGTGCTAATACATGGATTGTC
ATATTCATGCCGATCACCTGGCTTCTTGAATTCCAGCCAAGGGTGGAAGCTGCTATGGTG
AATGCCAGAATACGCAAAACAGTTAGAGCAAATAATGCTAAGGTGGGTTATATTGGGGCT
GCTGCTGATTTCAACTACGATCATCAACATCTCGGAACAGACCCTCAAACACTAGTTGAA
ATTGCTGAGGGCCGCCACCCCTTCTCCTCGGCTCTTAAAAATGCTAAGAACCCAGTCATC
ATCGTCGGTGCTGGTGTGTTTGACCGAGAGGACAAGGATGCTGTTTTTGCTGCTGTTGAC
ACTATTGCGAAGAACAATAATGTTGTGAGATCTGATTGGAATGGACTAAATGTGTTGCTG
CTGAATGCTGCCCAAGCTGCCGCTCTTGATCTTGGACTTGTGCCTGAATCTGAAAAATGC
ATTGATTCTGCGAAGTTTGTATATTTGATGGGTGCTGATGATGTGAGCTTGGACAAACTT
CCAGATGACGCCTTTGTGGTTTACCAAGGTCACCATGGTGATCGTGGTGTATATCGTGCC
AATGTGATTTTGCCGGCATCTGCTTTCACCGAGAAAGAAGGAATATATGAAAACACAGAA
GGATGTGCTCAGATCACACTGCCAGCCGTTCCTACTGTGGGTGATTCCAGGGATGATTGG
AAGATAATCAGAGCATTATCTGAGGTCGCAGGTATTGGATTACCCTATGATAGTCTAGGG
GCAATCCGATCTCGAATTGGGACAGTGGCACCAAATCTCCTGGAATTGGATGAGAGAACA
CCAGCCACATTCTCAACTTCTTTAAGACCTGAGGTCAGCCAAAAAGTAAGTTCAACTCCA
TTCACACCTGCTGTGGAGAACTTCTACATGACTGATGCAATTACTAGGGCCTCAAAGATT
ATGGCTCAGTGTAGTGCCTTGCTAAGGAAATGA

Peptide Sequence

PEP ID

XP_016500126.1
PEP Infomation

PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial-like [Nicotiana tabacum]
Sequence

MGLGLLASRALRSSRIFRNPTNSVLRTIVSTPELNNADAAAATAPAPVPSDRSPVGGARV
HFPNPDDVIEVFVDGYPVKIPKGMTVLQACEIAGVDIPRFCYHSRLSIAGNCRMCLVEVE
KSPKPVASCAMPALPGMKIKTDTPIAKKAREGVMEFLLMNHPLDCPICDQGGECDLQDQS
MAFGSDRGRFTEMKRSVVDKNLGPLVKTVMTRCIQCTRCVRFATEVAGTEDLGMLGRGSG
EEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKARNWELKGTESIDVTDAVGSNIRI
DSRGPEVMRVVPRLNEVLHFIIALMSFLSEMFSGANTWIVIFMPITWLLEFQPRVEAAMV
NARIRKTVRANNAKVGYIGAAADFNYDHQHLGTDPQTLVEIAEGRHPFSSALKNAKNPVI
IVGAGVFDREDKDAVFAAVDTIAKNNNVVRSDWNGLNVLLLNAAQAAALDLGLVPESEKC
IDSAKFVYLMGADDVSLDKLPDDAFVVYQGHHGDRGVYRANVILPASAFTEKEGIYENTE
GCAQITLPAVPTVGDSRDDWKIIRALSEVAGIGLPYDSLGAIRSRIGTVAPNLLELDERT
PATFSTSLRPEVSQKVSSTPFTPAVENFYMTDAITRASKIMAQCSALLRK

Transcript Sequence

Gene sequence data has not been registered.